maprintdr

Precisely describes the map whose numerical Id in the heap is given using a reverse order.

Synopsis:

The maprintdr command is invoked either:

• maprintdr Options
• maprintdr MapId

Description:

The maprintdr command prints an extensive description of the map whose numerical id has been given as argument using a reverse marker ordering. The purpose of using a reverse marker ordering is to perform an easier map comparison when two maps in the heap have order which are similar up to a map reversal. Otherwise, the commands performs as maprintd.

Arguments:

• Options : -u to obtain the synopsys of the normal use, -h to print a one line description, -H to print a short help.
• MapId: the numerical id of the map in the heap.

Returns:

nothing.

Example:

   CarthaGene version 1.2-LKH, Copyright (c) 1997-2010 (INRA).

   CarthaGene comes with ABSOLUTELY NO WARRANTY.
   CarthaGene is free software. You are welcome to redistribute it,
   under certain conditions. See the License file for information.

Type 'help' for help.

CG> dsload Data/bc.cg
{1 f2 backcross 20 208 /home/tschiex/Dev/carthagene/doc/user/exemple/Data/b...
CG> buildfw  3 3 {} 0
...
CG> maprintd 0

Map  0 : log10-likelihood =   -14.70, log-e-likelihood =   -33.86
-------:

Data Set Number  1 :

             Markers Distance    Cumulative  Distance   Theta       2pt
Pos  Id name         Haldane     Haldane     Kosambi    (%%age)      LOD

  1   8  MS8           3.3 cM      0.0 cM      3.2 cM     3.2 %      7.4
  2  10 MS10          12.2 cM      3.3 cM     11.0 cM    10.8 %      2.7
  3  14 MS14        ----------              ----------
                      15.5 cM                 14.2 cM


        3 markers, log10-likelihood =   -14.70
                   log-e-likelihood =   -33.86

CG> maprintdr 0

Map  0 : log10-likelihood =   -14.70, log-e-likelihood =   -33.86
-------:

Data Set Number  1 :

             Markers Distance    Cumulative  Distance   Theta       2pt
Pos  Id name         Haldane     Haldane     Kosambi    (%%age)      LOD

  1  14 MS14          12.2 cM      0.0 cM     11.0 cM    10.8 %      2.7
  2  10 MS10           3.3 cM     12.2 cM      3.2 cM     3.2 %      7.4
  3   8  MS8        ----------              ----------
                      15.5 cM                 14.2 cM


        3 markers, log10-likelihood =   -14.70
                   log-e-likelihood =   -33.86

CG>

See also:

• maprint (2.4.8)
• heaprintd (2.4.5)