mapordget

Returns a list describing the order of the markers in the map whose numerical Id in the heap is given.

Synopsis:

The mapordget command is invoked either as:

• mapordget Options
• mapordget MapId

Description:

The mapordget command returns a list that gives the order of the numerical Ids of the markers in the map whose numerical Id in the heap in given as argument.

Arguments:

• Options : -u to obtain the synopsys of the normal use, -h to print a one line description, -H to print a short help.
• MapId: the numerical Id of the map in the heap.

Returns:

a list giving the order of the markers numerical Ids.

Example:

   CarthaGene version 1.2-LKH, Copyright (c) 1997-2010 (INRA).

   CarthaGene comes with ABSOLUTELY NO WARRANTY.
   CarthaGene is free software. You are welcome to redistribute it,
   under certain conditions. See the License file for information.

Type 'help' for help.

CG> dsload Data/bc1.cg
{1 f2 backcross 17 208 /home/tschiex/Dev/carthagene/doc/user/exemple/Data/b...
CG> dsload Data/rh1.cg
{2 haploid RH 13 118 /home/tschiex/Dev/carthagene/doc/user/exemple/Data/rh1...
CG> dsmergor 1 2
{3 merged by order 21 326}
CG> sem

Map -1 : log10-likelihood =  -795.54
-------:
 Set : Marker List ...
   1 : MS4 MS5 MS13 MS6 MS11 MS17 MS16 MS8 MS7 MS2 MS3 MS9 MS15 MS12 MS20 M...
   2 : MS4 MS5      MS6                MS8 MS7     MS3 MS9 MS15            ...

CG> mapordget 0
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21

See also:

• mapget (2.4.13)
• maprint (2.4.8)