mrkselget

Returns the list of the numerical Id of all active markers.

Synopsis:

The mrkselget command is invoked either as:

• mrkselget Options
• mrkselget

Description:

the command returns the list of the numerical Ids of the active markers (see mrkselset).

Arguments:

• Options : -u to obtain the synopsys of the normal use, -h to print a one line description, -H to print a short help.

Returns:

the list of the numerical Id of all the active markers.

Example:

   CarthaGene version 1.2-LKH, Copyright (c) 1997-2010 (INRA).

   CarthaGene comes with ABSOLUTELY NO WARRANTY.
   CarthaGene is free software. You are welcome to redistribute it,
   under certain conditions. See the License file for information.

Type 'help' for help.

CG> dsload Data/rh.cg
{1 haploid RH 53 118 /home/tschiex/Dev/carthagene/doc/user/exemple/Data/rh.cg}
CG> group 0.3 3

Linkage Groups :
---------------:
LOD threshold=3.00
Distance threshold=30.00:

 Group ID : Marker ID List ...
        1 : 52
        2 : 42 48 47 45 46 44 43
        3 : 41
        4 : 38
        5 : 37 39
        6 : 36 40
        7 : 35
        8 : 25
        9 : 22
       10 : 19 32 31 28 30 27 26 20 21
       11 : 13 14
       12 : 11 12
       13 : 10 15 16 18 17
       14 : 7
       15 : 6 51 8 53 50 9
       16 : 4 34 33 24 23 5
       17 : 3 29
       18 : 2 49
       19 : 1
19
CG> mrkselset [groupget 10]

CG> mrkselget
19 32 31 28 30 27 26 20 21
CG> mrknames [mrkselget]
G5 G18 G17 G14 G16 G13 G12 G6 G7

See also:

• mrkselset (2.3.14)
• mrkallget (2.3.1)