mrkinfo

Displays basic information on all known markers.

Synopsis:

The mrkinfo command is invoked either as:

• mrkinfo Options
• mrkinfo

Description:

For each marker known to the system, the command displays its numerical Id, its name, the numerical Id of all the data-sets in which the marker is defined and also if the marker has been merged (see mrkmerge, section 2.3.9) with another marker: when the marker $i$ has been merged with the marker $j$ the result of the merging being stored in $i$, then the information on $i$ mentions $j$.

Arguments :

• Options : -u to obtain the synopsys of the normal use, -h to print a one line description, -H to print a short help.

Returns:

nothing

Example:

   CarthaGene version 1.2-LKH, Copyright (c) 1997-2010 (INRA).

   CarthaGene comes with ABSOLUTELY NO WARRANTY.
   CarthaGene is free software. You are welcome to redistribute it,
   under certain conditions. See the License file for information.

Type 'help' for help.

CG> dsload Data/bc.cg
{1 f2 backcross 20 208 /home/tschiex/Dev/carthagene/doc/user/exemple/Data/b...
CG> dsload Data/rh.cg
{2 haploid RH 53 118 /home/tschiex/Dev/carthagene/doc/user/exemple/Data/rh.cg}
CG> dsmergor 1 2
{3 merged by order 59 326}
CG> mrkinfo

Markers :
--------:
Num                Names : Sets         Merges
  1                  MS1 :   1   2   3
  2                  MS2 :   1   2   3
  3                  MS3 :   1   2   3
  4                  MS4 :   1   2   3
  5                  MS5 :   1   2   3
  6                  MS6 :   1   2   3
  7                  MS7 :   1   2   3
  8                  MS8 :   1   2   3
  9                  MS9 :   1   2   3
 10                 MS10 :   1       3
 11                 MS11 :   1       3
 12                 MS12 :   1       3
 13                 MS13 :   1   2   3
 14                 MS14 :   1       3
 15                 MS15 :   1   2   3
 16                 MS16 :   1       3
 17                 MS17 :   1   2   3
 18                 MS18 :   1       3
 19                 MS19 :   1   2   3
 20                 MS20 :   1   2   3
 21                   G1 :       2   3
 22                   G2 :       2   3
 23                   G3 :       2   3
 24                   G4 :       2   3
 25                   G5 :       2   3
 26                   G6 :       2   3
 27                   G7 :       2   3
 28                   G8 :       2   3
 29                   G9 :       2   3
 30                  G10 :       2   3
 31                  G11 :       2   3
 32                  G12 :       2   3
 33                  G13 :       2   3
 34                  G14 :       2   3
 35                  G15 :       2   3
 36                  G16 :       2   3
 37                  G17 :       2   3
 38                  G18 :       2   3
 39                  G19 :       2   3
 40                  G20 :       2   3
 41                  G21 :       2   3
 42                  G22 :       2   3
 43                  G23 :       2   3
 44                  G24 :       2   3
 45                  G25 :       2   3
 46                  G26 :       2   3
 47                  G27 :       2   3
 48                  G28 :       2   3
 49                  G29 :       2   3
 50                  G30 :       2   3
 51                  G31 :       2   3
 52                  G32 :       2   3
 53                  G33 :       2   3
 54                  G34 :       2   3
 55                  G35 :       2   3
 56                  G36 :       2   3
 57                  G37 :       2   3
 58                  G39 :       2   3
 59                  G40 :       2   3

See also :

• mrkmerge (2.3.9)
• dsinfo (2.2.5)