Converts a standard RH dataset already loaded in memory to a "radiated hybrid error" data set, allowing for error detection and correction using the imputation command.
The dsrhconv command is invoked either as:
CarthaGene version 1.2-LKH, Copyright (c) 1997-2010 (INRA). CarthaGene comes with ABSOLUTELY NO WARRANTY. CarthaGene is free software. You are welcome to redistribute it, under certain conditions. See the License file for information. Type 'help' for help. #we load a RH dataset CG> dsload Data/rh1.cg {1 haploid RH 13 118 /home/tschiex/Dev/carthagene/doc/user/exemple/Data/rh1... # we realize we want to deal with errors. We look for the dataset number CG> dsinfo Data Sets : ----------: ID Data Type markers individuals filename constraints... 1 haploid RH 13 118 rh1.cg # and create a new dataset with the error model CG> dsrhconv 1 error 2 # the number is the data set number of the new data set CG>
Thomas Schiex 2018-03-23