dsrhconv

Converts a standard RH dataset already loaded in memory to a "radiated hybrid error" data set, allowing for error detection and correction using the imputation command.

Synopsis:

The dsrhconv command is invoked either as:

• dsrhconv Options
• dsrhconv DatasetId

Description:

From an existing loaded RH dataset, the dsrhconv command will create a new RH dataset having the "radiated hybrid error" type. The command return the numerical Id of the new dataset.

Arguments:

• Options : -u to obtain the synopsys of the normal use, -h to print a one line description, -H to print a short help.
• DatasetId The numerical Id of an already loaded RH dataset. It can be obtained using the dsinfo command.

Returns:

the numerical Id of the new dataset created.

Example:

   CarthaGene version 1.2-LKH, Copyright (c) 1997-2010 (INRA).

   CarthaGene comes with ABSOLUTELY NO WARRANTY.
   CarthaGene is free software. You are welcome to redistribute it,
   under certain conditions. See the License file for information.

Type 'help' for help.

#we load a RH dataset
CG> dsload Data/rh1.cg
{1 haploid RH 13 118 /home/tschiex/Dev/carthagene/doc/user/exemple/Data/rh1...
# we realize we want to deal with errors. We look for the dataset number
CG> dsinfo

Data Sets :
----------:
ID        Data Type    markers individuals             filename constraints...
 1       haploid RH         13         118               rh1.cg

# and create a new dataset with the error model
CG> dsrhconv 1 error
2
# the number is the data set number of the new data set
CG>

See also:

• dsinfo (2.2.5)